alignment against mycobacterium abscessus atcc 19977 reference sequences Search Results


99
ATCC m abscessus subsp abscessus reference genome atcc 19977
M Abscessus Subsp Abscessus Reference Genome Atcc 19977, supplied by ATCC, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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99
ATCC synonymous mutations
Synonymous Mutations, supplied by ATCC, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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96
ATCC m abscessus
In vitro activity of MMV688845 against <t> M. abscessus </t> reference strains and clinical isolates
M Abscessus, supplied by ATCC, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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95
ATCC t405 against m abscessus reference strain atcc 19977
a Structures of the carbapenem Imipenem and the penem Faropenem are shown with red arrows indicating the differences in the ring structures. b Structure of the new penem developed here, <t>T405.</t>
T405 Against M Abscessus Reference Strain Atcc 19977, supplied by ATCC, used in various techniques. Bioz Stars score: 95/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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93
Addgene inc ptec27
a Structures of the carbapenem Imipenem and the penem Faropenem are shown with red arrows indicating the differences in the ring structures. b Structure of the new penem developed here, <t>T405.</t>
Ptec27, supplied by Addgene inc, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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90
MiddleBrook Pharmaceuticals 106 cfu/ml mab 19977
a Structures of the carbapenem Imipenem and the penem Faropenem are shown with red arrows indicating the differences in the ring structures. b Structure of the new penem developed here, <t>T405.</t>
106 Cfu/Ml Mab 19977, supplied by MiddleBrook Pharmaceuticals, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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106 cfu/ml mab 19977 - by Bioz Stars, 2026-09
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90
Johns Hopkins HealthCare m. abscessus isolate m9507
a Structures of the carbapenem Imipenem and the penem Faropenem are shown with red arrows indicating the differences in the ring structures. b Structure of the new penem developed here, <t>T405.</t>
M. Abscessus Isolate M9507, supplied by Johns Hopkins HealthCare, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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93
Proteintech antibodies against mybpc3
The studied variant is indicated in the representation. cMyBP-C is composed of 11 domains, numbered C0 to C10 from the N-terminus to C-terminus. It includes 8 immunoglobulin (IgI) domains (circles) and 3 fibronectin type III (FnIII) domains (rectangles). Four specific phosphorylation sites are located between C1 and C2, known as MyBP-C motif. The regions of interaction with other sarcomeric proteins (actin, myosin, and titin) are shown with dotted arrows. The relationship between the 35 exons of <t>MYBPC3</t> cDNA and cMyBP-C domains is indicated by dashed lines.
Antibodies Against Mybpc3, supplied by Proteintech, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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90
Becton Dickinson middlebrook 7h9
The studied variant is indicated in the representation. cMyBP-C is composed of 11 domains, numbered C0 to C10 from the N-terminus to C-terminus. It includes 8 immunoglobulin (IgI) domains (circles) and 3 fibronectin type III (FnIII) domains (rectangles). Four specific phosphorylation sites are located between C1 and C2, known as MyBP-C motif. The regions of interaction with other sarcomeric proteins (actin, myosin, and titin) are shown with dotted arrows. The relationship between the 35 exons of <t>MYBPC3</t> cDNA and cMyBP-C domains is indicated by dashed lines.
Middlebrook 7h9, supplied by Becton Dickinson, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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90
MiddleBrook Pharmaceuticals middlebrook 7h9 broth
The studied variant is indicated in the representation. cMyBP-C is composed of 11 domains, numbered C0 to C10 from the N-terminus to C-terminus. It includes 8 immunoglobulin (IgI) domains (circles) and 3 fibronectin type III (FnIII) domains (rectangles). Four specific phosphorylation sites are located between C1 and C2, known as MyBP-C motif. The regions of interaction with other sarcomeric proteins (actin, myosin, and titin) are shown with dotted arrows. The relationship between the 35 exons of <t>MYBPC3</t> cDNA and cMyBP-C domains is indicated by dashed lines.
Middlebrook 7h9 Broth, supplied by MiddleBrook Pharmaceuticals, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/alignment+against+mycobacterium+abscessus+atcc+19977+reference+sequences/middlebrook+7h9+broth/10__1128_slash_aac__01158___15-75-14-13
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90
Gallus BioPharmaceuticals gallus.gallus
The studied variant is indicated in the representation. cMyBP-C is composed of 11 domains, numbered C0 to C10 from the N-terminus to C-terminus. It includes 8 immunoglobulin (IgI) domains (circles) and 3 fibronectin type III (FnIII) domains (rectangles). Four specific phosphorylation sites are located between C1 and C2, known as MyBP-C motif. The regions of interaction with other sarcomeric proteins (actin, myosin, and titin) are shown with dotted arrows. The relationship between the 35 exons of <t>MYBPC3</t> cDNA and cMyBP-C domains is indicated by dashed lines.
Gallus.Gallus, supplied by Gallus BioPharmaceuticals, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/alignment+against+mycobacterium+abscessus+atcc+19977+reference+sequences/gallus+gallus++chicken+/pmc03499245__pgen__1003035__s003-170-37-38
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Image Search Results


In vitro activity of MMV688845 against  M. abscessus  reference strains and clinical isolates

Journal: Microbiology Spectrum

Article Title: In Vitro Profiling of the Synthetic RNA Polymerase Inhibitor MMV688845 against Mycobacterium abscessus

doi: 10.1128/spectrum.02760-22

Figure Lengend Snippet: In vitro activity of MMV688845 against M. abscessus reference strains and clinical isolates

Article Snippet: To study the synergy of MMV688845 with approved antimycobacterial drugs and to assess its suitability for combination therapy, we performed synergy testing against M. abscessus (ATCC 19977) by checkerboard assays.

Techniques: In Vitro, Activity Assay, Infection

MICs and MBCs of MMV688845 and rifabutin against  M. abscessus  subsp. abscessus ATCC 19977

Journal: Microbiology Spectrum

Article Title: In Vitro Profiling of the Synthetic RNA Polymerase Inhibitor MMV688845 against Mycobacterium abscessus

doi: 10.1128/spectrum.02760-22

Figure Lengend Snippet: MICs and MBCs of MMV688845 and rifabutin against M. abscessus subsp. abscessus ATCC 19977

Article Snippet: To study the synergy of MMV688845 with approved antimycobacterial drugs and to assess its suitability for combination therapy, we performed synergy testing against M. abscessus (ATCC 19977) by checkerboard assays.

Techniques: Infection

Bactericidal activity of MMV688845 and rifabutin against M. abscessus ATCC 19977. LOD, limit of detection. Experiments were carried out in duplicate or triplicate. Results are means, with the standard deviations displayed as error bars. A one-way analysis of variance (ANOVA) multiple-comparison test was performed using GraphPad Prism 8 software to compare treated groups with the DMSO control. ****, P ≤ 0.0001.

Journal: Microbiology Spectrum

Article Title: In Vitro Profiling of the Synthetic RNA Polymerase Inhibitor MMV688845 against Mycobacterium abscessus

doi: 10.1128/spectrum.02760-22

Figure Lengend Snippet: Bactericidal activity of MMV688845 and rifabutin against M. abscessus ATCC 19977. LOD, limit of detection. Experiments were carried out in duplicate or triplicate. Results are means, with the standard deviations displayed as error bars. A one-way analysis of variance (ANOVA) multiple-comparison test was performed using GraphPad Prism 8 software to compare treated groups with the DMSO control. ****, P ≤ 0.0001.

Article Snippet: To study the synergy of MMV688845 with approved antimycobacterial drugs and to assess its suitability for combination therapy, we performed synergy testing against M. abscessus (ATCC 19977) by checkerboard assays.

Techniques: Activity Assay, Comparison, Software, Control

Characterization of  M. abscessus  MMV688845-resistant mutants

Journal: Microbiology Spectrum

Article Title: In Vitro Profiling of the Synthetic RNA Polymerase Inhibitor MMV688845 against Mycobacterium abscessus

doi: 10.1128/spectrum.02760-22

Figure Lengend Snippet: Characterization of M. abscessus MMV688845-resistant mutants

Article Snippet: To study the synergy of MMV688845 with approved antimycobacterial drugs and to assess its suitability for combination therapy, we performed synergy testing against M. abscessus (ATCC 19977) by checkerboard assays.

Techniques: Mutagenesis

Visualization of RpoB mutations in an M. abscessus homology model. Beige, M. tuberculosis RpoB [PDB 5UHE ] with d-AAP 1 bound; light blue, M. abscessus homology model built using RoseTTAfold; red, M. abscessus resistance mutations; green, H bonds. ( , ).

Journal: Microbiology Spectrum

Article Title: In Vitro Profiling of the Synthetic RNA Polymerase Inhibitor MMV688845 against Mycobacterium abscessus

doi: 10.1128/spectrum.02760-22

Figure Lengend Snippet: Visualization of RpoB mutations in an M. abscessus homology model. Beige, M. tuberculosis RpoB [PDB 5UHE ] with d-AAP 1 bound; light blue, M. abscessus homology model built using RoseTTAfold; red, M. abscessus resistance mutations; green, H bonds. ( , ).

Article Snippet: To study the synergy of MMV688845 with approved antimycobacterial drugs and to assess its suitability for combination therapy, we performed synergy testing against M. abscessus (ATCC 19977) by checkerboard assays.

Techniques:

In vitro activity of antibiotics against  M. abscessus  ATCC 19977

Journal: Microbiology Spectrum

Article Title: In Vitro Profiling of the Synthetic RNA Polymerase Inhibitor MMV688845 against Mycobacterium abscessus

doi: 10.1128/spectrum.02760-22

Figure Lengend Snippet: In vitro activity of antibiotics against M. abscessus ATCC 19977

Article Snippet: To study the synergy of MMV688845 with approved antimycobacterial drugs and to assess its suitability for combination therapy, we performed synergy testing against M. abscessus (ATCC 19977) by checkerboard assays.

Techniques: In Vitro, Activity Assay

FICI values for combinations of MMV688845 with antimycobacterial drugs against  M. abscessus  ATCC 19977 <xref ref-type= a " width="100%" height="100%">

Journal: Microbiology Spectrum

Article Title: In Vitro Profiling of the Synthetic RNA Polymerase Inhibitor MMV688845 against Mycobacterium abscessus

doi: 10.1128/spectrum.02760-22

Figure Lengend Snippet: FICI values for combinations of MMV688845 with antimycobacterial drugs against M. abscessus ATCC 19977 a

Article Snippet: To study the synergy of MMV688845 with approved antimycobacterial drugs and to assess its suitability for combination therapy, we performed synergy testing against M. abscessus (ATCC 19977) by checkerboard assays.

Techniques:

Intracellular synergy of MMV688845 and clarithromycin (CLR). (A to C) Results of the macrophage infection assay with 1.5 μM bedaquiline (BDQ) (A), 3.1 μM CLR plus 1.6 μM MMV688845 (B), or 1% DMSO (C). Pictures were taken with a Cytation 5 imaging reader fluorescence microscope (BioTek). THP-1 macrophages are shown in blue, and M. abscessus (pTEC27) cells are in red. (D to F) growth inhibition of intracellular M. abscessus in the presence of 1.6 μM MMV688845 plus CLR (D), MMV688845 (E), or CLR. Experiments were carried out in duplicate, and the results presented are means, with the standard deviations displayed as error bars.

Journal: Microbiology Spectrum

Article Title: In Vitro Profiling of the Synthetic RNA Polymerase Inhibitor MMV688845 against Mycobacterium abscessus

doi: 10.1128/spectrum.02760-22

Figure Lengend Snippet: Intracellular synergy of MMV688845 and clarithromycin (CLR). (A to C) Results of the macrophage infection assay with 1.5 μM bedaquiline (BDQ) (A), 3.1 μM CLR plus 1.6 μM MMV688845 (B), or 1% DMSO (C). Pictures were taken with a Cytation 5 imaging reader fluorescence microscope (BioTek). THP-1 macrophages are shown in blue, and M. abscessus (pTEC27) cells are in red. (D to F) growth inhibition of intracellular M. abscessus in the presence of 1.6 μM MMV688845 plus CLR (D), MMV688845 (E), or CLR. Experiments were carried out in duplicate, and the results presented are means, with the standard deviations displayed as error bars.

Article Snippet: To study the synergy of MMV688845 with approved antimycobacterial drugs and to assess its suitability for combination therapy, we performed synergy testing against M. abscessus (ATCC 19977) by checkerboard assays.

Techniques: Infection, Imaging, Fluorescence, Microscopy, Inhibition

Plasma concentration-time profile of MMV688845 following a single oral dose of 25 mg/kg in CD-1 mice. The MIC of MMV688845 against M. abscessus K21 ( <xref ref-type=Table 1 ) is indicated by a dotted line. Experiments were carried out in duplicate, and the results presented are as means, with the standard deviations displayed as error bars. " width="100%" height="100%">

Journal: Microbiology Spectrum

Article Title: In Vitro Profiling of the Synthetic RNA Polymerase Inhibitor MMV688845 against Mycobacterium abscessus

doi: 10.1128/spectrum.02760-22

Figure Lengend Snippet: Plasma concentration-time profile of MMV688845 following a single oral dose of 25 mg/kg in CD-1 mice. The MIC of MMV688845 against M. abscessus K21 ( Table 1 ) is indicated by a dotted line. Experiments were carried out in duplicate, and the results presented are as means, with the standard deviations displayed as error bars.

Article Snippet: To study the synergy of MMV688845 with approved antimycobacterial drugs and to assess its suitability for combination therapy, we performed synergy testing against M. abscessus (ATCC 19977) by checkerboard assays.

Techniques: Clinical Proteomics, Concentration Assay

a Structures of the carbapenem Imipenem and the penem Faropenem are shown with red arrows indicating the differences in the ring structures. b Structure of the new penem developed here, T405.

Journal: Communications Biology

Article Title: Development of a penem antibiotic against Mycobacteroides abscessus

doi: 10.1038/s42003-020-01475-2

Figure Lengend Snippet: a Structures of the carbapenem Imipenem and the penem Faropenem are shown with red arrows indicating the differences in the ring structures. b Structure of the new penem developed here, T405.

Article Snippet: Next, we determined the MIC of T405 against M. abscessus reference strain ATCC 19977, and found it to be 2 μg/mL.

Techniques:

MICs of  T405,  imipenem and faropenem tested against the reference strain (ATCC 19977) and 20 clinical strains of  M. abscessus  in vitro.

Journal: Communications Biology

Article Title: Development of a penem antibiotic against Mycobacteroides abscessus

doi: 10.1038/s42003-020-01475-2

Figure Lengend Snippet: MICs of T405, imipenem and faropenem tested against the reference strain (ATCC 19977) and 20 clinical strains of M. abscessus in vitro.

Article Snippet: Next, we determined the MIC of T405 against M. abscessus reference strain ATCC 19977, and found it to be 2 μg/mL.

Techniques:

Frequency of spontaneous resistant mutants of M. abscessus ATCC 19977 recovered against T405 and imipenem at their individual MICs and when the T405 MIC is combined with avibactam at its individual MIC.

Journal: Communications Biology

Article Title: Development of a penem antibiotic against Mycobacteroides abscessus

doi: 10.1038/s42003-020-01475-2

Figure Lengend Snippet: Frequency of spontaneous resistant mutants of M. abscessus ATCC 19977 recovered against T405 and imipenem at their individual MICs and when the T405 MIC is combined with avibactam at its individual MIC.

Article Snippet: Next, we determined the MIC of T405 against M. abscessus reference strain ATCC 19977, and found it to be 2 μg/mL.

Techniques:

a Escalating doses of T405 administered alone. b 450 mg/kg dose of T405 administered alone and in combination with probenecid. c Single-dose plasma PK parameters for total T405 concentration in mice after subcutaneous injection of 25 mg/kg ( n = 3 mice per time point per arm).

Journal: Communications Biology

Article Title: Development of a penem antibiotic against Mycobacteroides abscessus

doi: 10.1038/s42003-020-01475-2

Figure Lengend Snippet: a Escalating doses of T405 administered alone. b 450 mg/kg dose of T405 administered alone and in combination with probenecid. c Single-dose plasma PK parameters for total T405 concentration in mice after subcutaneous injection of 25 mg/kg ( n = 3 mice per time point per arm).

Article Snippet: Next, we determined the MIC of T405 against M. abscessus reference strain ATCC 19977, and found it to be 2 μg/mL.

Techniques: Clinical Proteomics, Concentration Assay, Injection

The studied variant is indicated in the representation. cMyBP-C is composed of 11 domains, numbered C0 to C10 from the N-terminus to C-terminus. It includes 8 immunoglobulin (IgI) domains (circles) and 3 fibronectin type III (FnIII) domains (rectangles). Four specific phosphorylation sites are located between C1 and C2, known as MyBP-C motif. The regions of interaction with other sarcomeric proteins (actin, myosin, and titin) are shown with dotted arrows. The relationship between the 35 exons of MYBPC3 cDNA and cMyBP-C domains is indicated by dashed lines.

Journal: PLOS One

Article Title: A novel variant in MYBPC3 causes hypertrophic cardiomyopathy by haploinsufficiency

doi: 10.1371/journal.pone.0333096

Figure Lengend Snippet: The studied variant is indicated in the representation. cMyBP-C is composed of 11 domains, numbered C0 to C10 from the N-terminus to C-terminus. It includes 8 immunoglobulin (IgI) domains (circles) and 3 fibronectin type III (FnIII) domains (rectangles). Four specific phosphorylation sites are located between C1 and C2, known as MyBP-C motif. The regions of interaction with other sarcomeric proteins (actin, myosin, and titin) are shown with dotted arrows. The relationship between the 35 exons of MYBPC3 cDNA and cMyBP-C domains is indicated by dashed lines.

Article Snippet: The membranes were then incubated with primary antibodies against MYBPC3 (Cat No.19977-1-AP, Proteintech) and tubulin (Cat No.11224-1-AP, Proteintech) at 4°C overnight.

Techniques: Variant Assay, Phospho-proteomics

(A) RT-qPCR analysis showing significantly decreased MYBPC3 mRNA levels in cardiac sample from the proband compared to control subjects. (B) Representative Western blot images demonstrating reduced cMyBP-C protein expression in the HCM heart relative to controls. (C) Semi-quantification of cMyBP-C protein levels normalized to tubulin. Data are presented as mean ± standard deviation (SD); * P < 0.05 versus controls. HCM = hypertrophic cardiomyopathy.

Journal: PLOS One

Article Title: A novel variant in MYBPC3 causes hypertrophic cardiomyopathy by haploinsufficiency

doi: 10.1371/journal.pone.0333096

Figure Lengend Snippet: (A) RT-qPCR analysis showing significantly decreased MYBPC3 mRNA levels in cardiac sample from the proband compared to control subjects. (B) Representative Western blot images demonstrating reduced cMyBP-C protein expression in the HCM heart relative to controls. (C) Semi-quantification of cMyBP-C protein levels normalized to tubulin. Data are presented as mean ± standard deviation (SD); * P < 0.05 versus controls. HCM = hypertrophic cardiomyopathy.

Article Snippet: The membranes were then incubated with primary antibodies against MYBPC3 (Cat No.19977-1-AP, Proteintech) and tubulin (Cat No.11224-1-AP, Proteintech) at 4°C overnight.

Techniques: Quantitative RT-PCR, Control, Western Blot, Expressing, Standard Deviation